I work as a Senior Bioinformatician at the cancer diagnostics company SAGA Diagnostics and am completing a PhD in cancer genomics at Lund University in Sweden.
My research focuses on the development of diagnostics based on tumor DNA/RNA deep sequencing (also known as next generation sequencing) to improve breast cancer treatment and survival. Most of my projects are embedded in the Sweden Cancerome Analysis Network–Breast (SCAN-B) study. Additionally I work on improving open source bioinformatics and reproducible research infrastructure by contributing to projects such as conda-forge, Bioconda, and Biopython.
Over the past 20 years I have contributed to a number of open source software projects, most notably the FreeBSD computer operating system. An overview can be found on OpenHub.
MSc in Bioinformatics
Lund University
BSc in Scientific Programming
Aachen University of Applied Sciences
My PhD work in developing RNA sequencing-based diagnostic tools for breast cancer.
A web-based application for exploring tumor somatic mutations.
I have been a developer with the FreeBSD operating system project since 2003. This page collates some related links.